# Research, Scholarly, and Creative Works: July 1, 2025 - June 30, 2026

This archive is organized by publication type. Items with a DOI use a DOI-safe
folder name, replacing `/` with `_`. arXiv-only items use `arxiv_<id>`.
Teaching works and software/application entries use site-based folders.

Downloaded files are open publisher PDFs, arXiv/author versions, or Figshare
files. Paywalled, embargoed, or non-open book entries have folders but no PDF.
Full BibTeX for the page is available at `year-in-review-2026.bib`.

## Journal

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| "I see models being a whole other thing": an empirical study of pre-trained model naming conventions and a tool for enhancing naming consistency | 2025-08-16 online; 2025-12 print | DOI: 10.1007/s10664-025-10711-4 | `journal/10.1007_s10664-025-10711-4/springer-version-of-record.pdf` |
| Using a Convolutional Neural Network to Predict Physician Likert Score Assignments to Synthetic Medical Images | 2025-09 | DOI: 10.1016/j.ijrobp.2025.06.3444 | No open PDF found; folder only |
| Exact dynamics and Bloch oscillations in a non-Hermitian zigzag Glauber-Fock lattice | 2025-10 | DOI: 10.1016/j.physa.2025.130811 | `journal/10.1016_j.physa.2025.130811/arxiv-author-version.pdf` |
| The Digital Scholar: Artificial Intelligence in Social Work Research | 2026-03-03 | DOI: 10.1177/10443894251407365 | Publisher PDF blocked/paywalled; folder only |
| Development of a Culturally Responsive Intervention for Stronger Communities | 2026-03-14 | DOI: 10.1177/10443894251332666 | Publisher PDF blocked/paywalled; folder only |
| Three-dimensional shape cues affect human and artificial recognition systems differently | 2026-05-29 | DOI: 10.1371/journal.pone.0338885 | `journal/10.1371_journal.pone.0338885/plos-version-of-record.pdf` |
| SysLLMatic: Large language models are software system optimizers | 2026 journal article | DOI: 10.1016/j.jss.2026.112929 | `journal/10.1016_j.jss.2026.112929/arxiv-preprint.pdf` |

## Conference

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| PARAVIRT: Userland Containers for Mobile Systems | 2025-07-21 conference; eCommons date 2025-11-04 | DOI: 10.1109/MobileCloud66020.2025.00015 | eCommons author PDF embargoed until 2026-09-01; folder only |
| Not-so-Secret Authentication: The SyncBleed Attacks and Defenses for Zero-Involvement Authentication Systems | 2025-08-04 | DOI: 10.1109/CSR64739.2025.11130070 | `conference/10.1109_CSR64739.2025.11130070/figshare-author-version.pdf` |
| Analyzing Adversarial Strategies and Countermeasures for Cyberbullying Detection | 2025-10-08 | DOI: 10.1007/978-3-032-07715-8_9 | Direct PDF attempt returned HTML; diagnostic saved in folder |
| LadderSym: A Multimodal Interleaved Transformer for Music Practice Error Detection | ICLR 2026; arXiv 2025-09-16 | OpenReview: cizuvfyQXs; arXiv: 2510.08580 | `conference/openreview_cizuvfyQXs_ICLR2026_LadderSym/arxiv-preprint.pdf` |
| AdaPerceiver: Transformers with Adaptive Width, Depth, and Tokens | CVPR 2026; arXiv 2025-11-22 | arXiv: 2511.18105 | `conference/cvpr2026_AdaPerceiver_arxiv_2511.18105/arxiv-preprint.pdf` |
| Inference-Time Alignment of Diffusion Models via Evolutionary Algorithms | CVPR 2026; arXiv 2025-05-30 | arXiv: 2506.00299 | `conference/cvpr2026_Inference-Time-Alignment_arxiv_2506.00299/arxiv-preprint.pdf` |
| Can LLMs Write Correct TLA+ Specifications? Evaluating Natural-Language-to-TLA+ Generation | ICSOFT 2026; arXiv 2026-06-04 | arXiv: 2606.05792 | `conference/icsoft2026_Can-LLMs-Write-Correct-TLA_arxiv_2606.05792/arxiv-preprint.pdf` |
| TLA-Prover: Verifiable TLA+ Specification Synthesis via Preference-Optimized Low-Rank Adaptation | ICSOFT 2026; arXiv 2026-06-04 | arXiv: 2606.06133 | `conference/icsoft2026_TLA-Prover_arxiv_2606.06133/arxiv-preprint.pdf` |

## Workshop

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| An Interactive Agentic HPC Tutor for Lesson Planning, Teaching, and Assessment | SC Workshops / EduHPC 2025, 2025-11 | DOI: 10.1145/3731599.3767386 | ACM PDF blocked/paywalled; folder only |
| Process-based Indicators of Vulnerability Re-Introducing Code Changes: An Exploratory Case Study | SVM 2026 / ICSE workshop, 2026-04-12 | DOI: 10.1145/3786165.3788438; arXiv: 2510.26676 | `workshop/10.1145_3786165.3788438/arxiv-preprint.pdf` |

## arXiv / Preprint / Working Paper

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| 2024 NSF CSSI-Cybertraining-SCIPE PI Meeting August 12 to 13, 2024, Charlotte, NC | 2025-07-05 | arXiv: 2507.04171 | `arxiv-preprint/arxiv_2507.04171/arxiv-report.pdf` |
| AgentHub: A Registry for Discoverable, Verifiable, and Reproducible AI Agents | 2025-10-03 | arXiv: 2510.03495 | `arxiv-preprint/arxiv_2510.03495/arxiv-preprint.pdf` |
| Operationalizing Research Software for Supply Chain Security | 2026-01-28 | arXiv: 2601.20980 | `arxiv-preprint/arxiv_2601.20980/arxiv-preprint.pdf` |
| An Empirical Investigation of Pre-Trained Deep Learning Model Reuse in the Scientific Process | 2026-03-13 | arXiv: 2603.13584 | `arxiv-preprint/arxiv_2603.13584/arxiv-preprint.pdf` |
| Beyond Local Code Optimization: Multi-Agent Reasoning for Software System Optimization | 2026-03-16 | arXiv: 2603.14703 | `arxiv-preprint/arxiv_2603.14703/arxiv-preprint.pdf` |
| HeyFriend Helper: A Conversational AI Web-App for Resource Access Among Low-Income Chicago Residents | 2026-03-26 | arXiv: 2603.25800 | `arxiv-preprint/arxiv_2603.25800/arxiv-preprint.pdf` |
| Evaluation of Winning Solutions of 2025 Low Power Computer Vision Challenge | 2026-04-21 | arXiv: 2604.19054 | `arxiv-preprint/arxiv_2604.19054/arxiv-preprint.pdf` |
| Now's the Time: Computer Science Must Evolve to Emphasize Software and Systems Engineering with Artificial Intelligence (AI) | 2026-04-29 | arXiv: 2604.27230 | `arxiv-preprint/arxiv_2604.27230/arxiv-preprint.pdf` |

## Books (All Time)

Books (All Time) intentionally includes all known authored or edited books so
older book work remains visible alongside the July 1, 2025 - June 30, 2026
reporting-window outputs.

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| High-Performance Java Platform Computing: Multithreaded and Networked Programming | 2000 | ISBN: 9780130161642; Prentice Hall / Sun Microsystems Press; DOI: 10.6084/m9.figshare.962958 | `books/isbn_9780130161642/high-performance-java-platform-computing.pdf` |
| Web Programming in Python: Techniques for Integrating Linux, Apache, and MySQL | 2002 | ISBN: 9780130410658; Prentice Hall PTR; DOI: 10.6084/m9.figshare.13547990 | `books/isbn_9780130410658/web-programming-in-python.pdf` |
| Core XML | Catalog metadata lists 2020 print-on-demand/reissue | ISBN: 9780130097163; Pearson Education | No open version found; `books/isbn_9780130097163/NOTE.txt`; publication metadata incomplete |
| Introduction to Statistics in Criminal Justice and Criminology: A Practical Approach to Calculating, Using, and Interpreting Data | 2026; bookseller date 2026-05-04 | ISBN: 9781118559239; Wiley | No open version found; `books/isbn_9781118559239/NOTE.txt` |
| Recursion | eBook date 2026-08-20 | ISBN: 9781032993183; CRC Press | No open version found; `books/isbn_9781032993183_OUTSIDE_WINDOW_AUG2026/NOTE.txt` |
| Intermediate C Programming | First published 2015; 2nd edition/copyright 2024 | ISBN: 9781032189819; Routledge | No open version found; `books/isbn_9781032189819/NOTE.txt` |
| Codename Revolution: The Nintendo Wii Platform | Original eBook/hardcover date 2012-02-24; paperback date 2024-12-17 | ISBNs: 9780262300537, 9780262016803, 9780262553780; MIT Press | No open version found; `books/isbn_9780262300537/NOTE.txt` |
| Software Engineering for Science | Original publication 2016; copyright 2017; paperback 2020 | ISBNs: 9781498743853, 9780367574277; CRC Press | No full-book open version found; `books/isbn_9781498743853/NOTE.txt`; publisher and eCommons records linked in HTML |
| Low-Power Computer Vision: Improve the Efficiency of Artificial Intelligence | Original publication 2022; paperback/reissue date 2024-10-04 | ISBN: 9780367755287; CRC Press; DOI: 10.1201/9781003162810 | Preview PDF linked through eCommons/publisher, but command-line download returned 403; `books/isbn_9780367755287/NOTE.txt` |

## Other Scholarly Output

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| 2030 Technology Megatrends | 2026 IEEE Future Directions report | IEEE landing page | Industry contribution; free gated download remains linked rather than locally cached |
| Episodes in Computing History - Salon Talk | 2025-07-24 | DOI: 10.6084/m9.figshare.29632070 | `other-scholarly-output/10.6084_m9.figshare.29632070/episodes-in-computing-history-talk.pdf` |
| Jazz Scale Patterns with Abjad and Lilypond | 2025-08-12 / 2025-08-17 version | DOI: 10.6084/m9.figshare.29887028 | `other-scholarly-output/10.6084_m9.figshare.29887028/jazz-scales-book.pdf` |
| Inclusive Mentoring of Research Students | 2025-10-31 | DOI: 10.6084/m9.figshare.30501749 | `other-scholarly-output/10.6084_m9.figshare.30501749/inclusive-mentoring-of-research-students.pdf` |
| Composition using Python and Abjad/LilyPond: Life Beyond Notation Software | 2026-03-21 / 2026-04-04 version | DOI: 10.6084/m9.figshare.31827391 | Main report and score PDFs downloaded; audio files intentionally not downloaded |

## Teaching Work

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| Introduction to Computer Science in Python: Principles and Practice | Site build 2026-06-18 | introcs-python.cs.luc.edu | Landing page snapshot saved at `teaching-work/introcs-python.cs.luc.edu/index.html`; live site linked in HTML |
| Introduction to Operating Systems: Principles and Practice | Site update 2026-05-28 | os.cs.luc.edu | Landing page snapshot saved at `teaching-work/os.cs.luc.edu/index.html`; live site linked in HTML |

## Software / Applications

| Work | Date Used | Identifier | Local Status |
| --- | --- | --- | --- |
| Jazz Scales Practice / jazz-patterns | App page last modified 2026-07-07; project release 2026-06-28 | jazz-patterns.gkt.sh requested; related live app jazz-scales.gkt.sh; GitHub: gkthiruvathukal/jazz-patterns | `jazz-patterns.gkt.sh` did not resolve during capture; related app snapshot saved at `software-applications/jazz-patterns.gkt.sh/jazz-scales-index.html`; note saved at `software-applications/jazz-patterns.gkt.sh/NOTE.txt` |
| Loyola CS Advising Checklist | App page last modified 2026-06-21 | advising.cs.luc.edu | Landing page snapshot saved at `software-applications/advising.cs.luc.edu/index.html`; live site linked in HTML |

## Notes

- Google Scholar was used as the starting point, but it did not expose all recent works.
- ORCID, Crossref, arXiv, Loyola eCommons, publisher pages, Figshare, OpenReview, IEEE Future Directions, teaching sites, and book-publisher/bookstore records were used to fill gaps.
- Books (All Time) uses the complete authored/edited book scope noted above.
- Teaching, software/application, and other non-publication impact items are included when they have a public landing page or citable record.